BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB005H11SP1|AL425448
(782 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1786 1547 0.0
>3x_Contig1786
Length = 33838
Score = 1547 bits (780), Expect = 0.0
Identities = 781/782 (99%)
Strand = Plus / Plus
Query: 1 taacatcaagattctgttttgatttccaagattgccagatatctcttggaatctcatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12984 taacatcaagattctgttttgatttccaagattgccagatatctcttggaatctcatttt 13043
Query: 61 gagaattgaaatgtgccaacagccgatgcctcagtgatcctgtggaccaatctgccggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13044 gagaattgaaatgtgccaacagccgatgcctcagtgatcctgtggaccaatctgccggta 13103
Query: 121 cagttggtgtattgacggatttatccctattctggaatgcgggaatgttatggaatagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13104 cagttggtgtattgacggatttatccctattctggaatgcgggaatgttatggaatagga 13163
Query: 181 tccaaaataggtaaattgaaacaatggacaacaataagcatgagcggggtctaaggtgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13164 tccaaaataggtaaattgaaacaatggacaacaataagcatgagcggggtctaaggtgtt 13223
Query: 241 tcatgggtagatgagaggacaagaaagtcaggtcaactggccttggaacattcttttctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13224 tcatgggtagatgagaggacaagaaagtcaggtcaactggccttggaacattcttttctt 13283
Query: 301 tttcctgcatctcgtttgtttttgtttcacattcctattgtctttagtttaagttttaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13284 tttcctgcatctcgtttgtttttgtttcacattcctattgtctttagtttaagttttaca 13343
Query: 361 tttccttagccttgggaatttgatacaccacagatcataaagattagagaacaaaggcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13344 tttccttagccttgggaatttgatacaccacagatcataaagattagagaacaaaggcca 13403
Query: 421 ttacccatctgagggggaggggggggtatactttctaccaaaactacgtaagtatggagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13404 ttacccatctgagggggaggggggggtatactttctaccaaaactacgtaagtatggagt 13463
Query: 481 aacatattccaaagcgtacctacaaaatagcagtcgtattagaagaacaaacgatattac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13464 aacatattccaaagcgtacctacaaaatagcagtcgtattagaagaacaaacgatattac 13523
Query: 541 aaattgaatatccagaaccaataatatcagagagtactttaatgcagaatcaaaagtaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13524 aaattgaatatccagaaccaataatatcagagagtactttaatgcagaatcaaaagtaac 13583
Query: 601 tttcagtcttgaatcttgtctaacagataaagataagtacctcgtctaatctaattgtat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13584 tttcagtcttgaatcttgtctaacagataaagataagtacctcgtctaatctaattgtat 13643
Query: 661 aaaccggaaatacaacttagaactaagttagataacaacataccattagcactcatgcat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13644 aaaccggaaatacaacttagaactaagttagataacaacataccattagcactcatgcat 13703
Query: 721 aatttagattataaaagagtgctaatggtatgtctggcgacgcctgahacattccgacgg 780
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 13704 aatttagattataaaagagtgctaatggtatgtctggcgacgcctgaaacattccgacgg 13763
Query: 781 at 782
||
Sbjct: 13764 at 13765
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6374
Number of Sequences: 1807
Number of extensions: 6374
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 782
length of database: 10,358,551
effective HSP length: 16
effective length of query: 766
effective length of database: 10,329,639
effective search space: 7912503474
effective search space used: 7912503474
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)